Comparison of dynamics of HIV-1 coreceptor usage in a long-term antiretroviral treatment adolescent by genotypic and phenotypic assays
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Creator 1. Sayamon Hongjaisee
2. Sartsin Chaipong
3. Tanawan Samleerat
Title Comparison of dynamics of HIV-1 coreceptor usage in a long-term antiretroviral treatment adolescent by genotypic and phenotypic assays
Publisher Faculty of Associated Medical Sciences, Chiang Mai University
Publication Year 2562
Journal Title Journal of Associated Medical Sciences
Journal Vol. 52
Journal No. 1
Page no. 14-17
Keyword HIV, coreceptor usage, tropism, CCR5, genotypic predictors
URL Website https://www.tci-thaijo.org/index.php/bulletinAMS/index
Website title Journal of Associated Medical Sciences
ISSN 25396056
Abstract The HIV-1 coreceptor usage can be determined by both phenotypic and genotypic assays. However, the phenotypic assays are expensive, time consuming, and require specialized laboratories, more interest has been driven toward genotypic assays, which are based on the prediction of coreceptor usage from V3 amino acid sequences using genotypic tools. Currently, they are preferred because of their accessibility, rapid results, and the low cost of these techniques. Nevertheless, the predictions are not always accurate; a false prediction of X4 variants may lead to unnecessarily precluding patients who could have benefited from receiving CCR5 inhibitors whereas a false prediction of R5 variants may lead to the reemergence of X4-strains under CCR5 inhibitors pressure. Herein, we discussed a case that had evidence of a coreceptor usage trend to be more of an X4 phenotype based on genotypic predictors, but it contrasted with phenotypic assay, which only voted to R5.
Journal of Associated Medical Sciences

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